It is also possible to display only certain sites together with the Features. 2ģ Note that it is now possible (since V2.0) to move the Restriction site and Features name boxes to highlight some of them before printing or copying the map. A double Click selects the corresponding sequence in the parent Sequence Window. A simple click on a Feature name selects the corresponding portion in the map. It is possible to switch between a Graphic Map with and without Feature using the checkbox present in the top left of the window ('Features'). They are represented by colored boxes with or without a pointing arrow. Features can be displayed in the Graphic Map. The scrolling of the sequence when selecting has also been improved. NB: note that since version 2.1 it is now possible to change the Sequence window size (as well as the character size under Windows AND MacOSX). It is possible to show/hide them using the 'Show Features' checkbox.Ģ When the insertion point is located within a Feature, the corresponding Feature's name is indicated above the Sequence Field. Display of Features in the Sequence Window Features are visible in color in the sequence window. This is particularly useful when deleting multiple Features. The button then gets red to indicate that no confirmation will be asked for. This pop-message can be avoided if you press the key before clicking on the button. A pop-up message will ask for confirmation before deleting a Feature (there is no undo). The + and button are used to add and delete a Feature respectively. To alter the order simply drag the Feature at another position in the list. The order in the list dictate the order by which Features will be drawn, and this can be important in case they overlap. To change the Feature color, click on the colored box and select another color. A feature can have or not a pointing arrow ('Arrow' checkbox). To decide to Show or Hide all features at once, press the key before clicking on the checkbox. Shown features are listed in Bold characters. One can select whether a feature will actually be displayed on the map (using the 'Show' checkbox). The Edit button is used to toggle between the 'protected' mode where no unwanted modification can be done and the 'Edit' mode. To edit (add/delete/modify) Features, one has to be in the 'Edit' mode. A list of Features is shown on the left double clicking on one will select the corresponding nucleotide sequence. Accessing features in the Sequence window A new tab has been added (Features) that gives access to features characteristics and management. The symbol indicate that this function has been added or updated in V2.1 I. Here are some descriptions and hints about these new possibilities. Handling Features/Annotations Since version 2.0, Serial Cloner handles annotations and features. Serial Cloner can import files saved in the Vector NTI, MacVector, ApE, DNAstar, pDRAW32 and GenBank formats and exports them in the universal FASTA format.1 SERIAL CLONER 2. PlasMapper automatically generates and annotates plasmid maps from an inputted plasmid DNA sequence. The NIH provides a range of Basic Local Alignment Search tools, databases and executables. The Molecular Cloning Designer Simulator is a platform for molecular cloning design, simulation and management with a unique flowchart design. Genome Compiler has an easy-to-use drag and drop interface allowing researchers to optimise their design process. everyVECTORĮveryVECTOR allows biologists to share annotated vector information, organise information, search for and analyse vectors. It’s free for academic researchers but there is a fee for industry users. Benchlingīenchling is an all-in-one solution for experiment design, note-taking and molecular biology. Made by a researcher for researchers, users can view circular or linear maps of DNA sequences. Having a powerful set of tools is essential in life science research so we’ve compiled the best free platforms for genetic engineers, molecular and synthetic biologists.ĪpE is an easy to use, cross-platform program.
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